Skip to content
Snippets Groups Projects

Repository graph

You can move around the graph by using the arrow keys.
Select Git revision
  • master default protected
1 result
Created with Raphaël 2.2.010Feb18Jan161413.gitlab-ci.yml: Fix package installationmastermaster.gitlab-ci.yml: Add coverind among the artifacts for the tests.gitlab-ci.yml: Switch to apt-get.gitlab-ci.yml: Add apt-update before installinglib: Add CLI11 libTests: add tests for the CLICoverind: Add info on BEDMultiCover: Fix case when window is larger than chromosomecoverind.cpp: CLI to build and query indexmulticover.hpp: refactor generateBED in smaller functionsmulticover: make getChrIndex constAdd LICENSEAdd tests and data for testsAdd an exampleRely on chromosome index rather than names for saving the BVAdd CIRefactor LDFLAGS options in MakefileAdd -DNDEBUG flag to compilation optionsUse MultiCover in benchmark.cpp instead of CoverindAdd class to deal with multiple sequencesRemove rank/select storage to file in CoverindAdd Coverind constructor with bit vectors passed in parametersrefactor Coverind constructorsAdd dataset for testsupdate benchmark.cppAdd gzstream libbug: byte EOF may exist in the filefixupLoading from saved filesSave: add . for the extensionDifferentiate reads starting or ending before positioncoverind.hpp: Use template for rank/select supportinit