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  • c23ff7bb3396e8c4e94a7d295aeee3645fb1abd3
  • main default protected
  • deltaEncoding
  • robinHood
  • v1.0.0
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Created with Raphaël 2.2.018Aug821Jul124Jun231012May427Apr2112531Mar302928252217Merge branch 'deltaEncoding' of https://gitlab.cristal.univ-lille.fr/lvandamm/indexkmertoread into deltaEncodingdeltaEncodingdeltaEncoding[not working] compression stepUpdate README.mdnot working - compression stepNot working - compression stepskip hash to occurance stepupdate makefile, bloc compressionadd TurboPFor submoduleversion using rank bitvectors/rank okv1.0.0v1.0.0Merge branch 'deltaEncoding' of https://gitlab.cristal.univ-lille.fr/lvandamm/indexkmertoread into deltaEncodingrank version okadd BitMagic submoduleversion OK with vector of vectors as indexadd pthash submodulecompil ok ; problem using iteratorcompile iteratoradd phage filesbloom filter & bool_iterator - not workingadd bbhash submoduleadd SIMDCompressionAndIntersection moduleKo to bits & integer with comma & refacto class IndexKo to Bits and int to string with commamainmainconvert int to strings with comma, convert Ko to bitsrobinHoodrobinHoodMerge branch 'main' of https://gitlab.cristal.univ-lille.fr/lvandamm/indexkmertoread into mainmodify resource usage in mainrename fasta fileUpdate Results.md, with comparison between full and empty indexUpdate Results.md with delta encodingdelta encoding in indexMerge branch 'main' of https://gitlab.cristal.univ-lille.fr/lvandamm/indexkmertoread into mainmodify kmer.faUpdate Results.mdmodify main & makefilemove Results.mdadd memory usage for 1 kmerdelete index_rh fileschange for robin hood hashtablefirst versionInitial commit