default_config.yaml

data_in: "../../data/selected_read"
data_out: "consensus/data"
format: "msa"
tool:  ["abpoa", "kalign", "kalign3", "mafft", "muscle", "spoa"]
threshold_1: ["30", "40", "50", "60", "70", "80"]
threshold_2 : ["30", "40", "50", "60", "70", "80"]
region: ["100", "200", "500", "1000", "2000"]
depth: ["10", "20", "50", "100", "150"]
align: ["muscle", "mafft"]
output_folder: "consensus"
ref_folder: "../../data/seq_selectes_region"